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SRX105376: Whole Genome Sequencing
1 ILLUMINA (Illumina HiSeq 2000) run: 5.9M spots, 1.2G bases, 836.2Mb downloads

UUID: b49d4256-e305-4fd1-9ea6-2abeec3f8b48
Design: Illumina sequencing of Plasmodium falciparum SenT135.09 via random selection
Submitted by: Broad Institute (BI)
Study: Plasmodium falciparum Multi-isolate project for SNP discovery
PRJNA51255 • SRP003502 • All experiments • All runs
show Abstracthide Abstract
We are sequencing 25 strains of Plasmodium falciparum. They will be indexed and pooled: 101 bp PE reads; 35X coverage for SNP discovery. We will be submitting traces and SNP calls.
Sample: Generic sample from Plasmodium falciparum SenT135.09
SAMN00117559 • SRS119091 • All experiments • All runs
Organism: Plasmodium falciparum SenT135.09
Library:
Name: Pond-81801
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward barcode
Group tagBasecalls
ATTCTAGG
110  reverse

Experiment attributes: (show all 9 attributes...) (hide...)
analysis_type: AssemblyWithReference
gssr_id: 114744.0
library_type: WholeGenomeShotgun
lsid: broadinstitute.org:bsp.prod.sample:24GBS
material_type: DNA:DNA Somatic
project: G14420
root_sample_id: SM-21KX7
sample_id: SM-24GBS
work_request: 25945
Pipeline: show...hide...
NameStepProgramVersionNotes
base caller2011-09-01 00:58:56.0GAPipelineRTA1.12.4.1Sequencer Application 1.4.5
Runs: 1 run, 5.9M spots, 1.2G bases, 836.2Mb
Run# of Spots# of BasesSizePublished
SRR3641225,855,2641.2G836.2Mb2011-11-13

ID:
122615

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